Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 AL358472.4-201ENST00000633140 710 ntBASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 AC005082.1-201ENST00000413042 2259 ntBASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 HOMER2P1-201ENST00000455653 964 ntBASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA6Q9Y5G7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 AC007613.1-201ENST00000572811 2597 ntBASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 CROCCP3-202ENST00000420820 1947 ntBASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 AC011558.1-201ENST00000623459 338 ntBASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA6Q9Y5G7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 AC120498.9-201ENST00000339021 3867 ntBASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 UPK3BP1-201ENST00000428678 509 ntBASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 PRSS44-201ENST00000515154 1146 ntBASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms