Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA9Q9Y5G4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA9Q9Y5G4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA9Q9Y5G4 AC093484.2-201ENST00000580996 2166 ntBASIC17.52■□□□□ 0.39
PCDHGA9Q9Y5G4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHGA9Q9Y5G4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 HBZP1-201ENST00000354915 429 ntBASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 MIR4674-201ENST00000582457 87 ntBASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 CR769767.2-201ENST00000622735 460 ntBASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA9Q9Y5G4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA9Q9Y5G4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 AL691432.2-201ENST00000607222 2038 ntBASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 TREX1-205ENST00000625293 1783 ntBASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 AL645929.1-201ENST00000420084 975 ntBASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 SPDYE13P-201ENST00000445314 798 ntBASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 NPAP1P7-201ENST00000613027 823 ntBASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA9Q9Y5G4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms