Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB11Q9Y5F2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 YBX1P2-201ENST00000489612 999 ntBASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 AL138966.2-201ENST00000621997 464 ntBASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB11Q9Y5F2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 AC007663.1-201ENST00000438948 1240 ntBASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 AC140113.3-201ENST00000605663 199 ntBASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB11Q9Y5F2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 AC092338.2-201ENST00000568827 1415 ntBASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 AP000550.4-202ENST00000639755 178 ntBASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB11Q9Y5F2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms