Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
YIPF1Q9Y548 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 KRT8P26-201ENST00000534154 1276 ntBASIC19.57■□□□□ 0.72
YIPF1Q9Y548 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.57■□□□□ 0.72
YIPF1Q9Y548 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 AP002383.4-201ENST00000442518 975 ntBASIC19.56■□□□□ 0.72
YIPF1Q9Y548 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 RNF126P1-202ENST00000569893 925 ntBASIC19.56■□□□□ 0.72
YIPF1Q9Y548 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
YIPF1Q9Y548 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 MIR3180-1-201ENST00000580374 94 ntBASIC19.55■□□□□ 0.72
YIPF1Q9Y548 MIR3180-3-201ENST00000584616 94 ntBASIC19.55■□□□□ 0.72
YIPF1Q9Y548 AC092329.2-201ENST00000598402 547 ntBASIC19.55■□□□□ 0.72
YIPF1Q9Y548 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.55■□□□□ 0.72
YIPF1Q9Y548 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 TSPY22P-201ENST00000427496 604 ntBASIC19.54■□□□□ 0.72
YIPF1Q9Y548 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
YIPF1Q9Y548 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms