Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP3Q9Y446 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.83■□□□□ 0.6
PKP3Q9Y446 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.83■□□□□ 0.6
PKP3Q9Y446 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PKP3Q9Y446 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP3Q9Y446 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.83■□□□□ 0.6
PKP3Q9Y446 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP3Q9Y446 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.83■□□□□ 0.6
PKP3Q9Y446 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP3Q9Y446 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.83■□□□□ 0.6
PKP3Q9Y446 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PKP3Q9Y446 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP3Q9Y446 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.82■□□□□ 0.6
PKP3Q9Y446 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP3Q9Y446 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP3Q9Y446 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.82■□□□□ 0.6
PKP3Q9Y446 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP3Q9Y446 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP3Q9Y446 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PKP3Q9Y446 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP3Q9Y446 AC128688.1-201ENST00000487626 519 ntBASIC18.82■□□□□ 0.6
PKP3Q9Y446 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.82■□□□□ 0.6
PKP3Q9Y446 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PKP3Q9Y446 RCC2P3-201ENST00000418112 1537 ntBASIC18.82■□□□□ 0.6
PKP3Q9Y446 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP3Q9Y446 AC090340.1-201ENST00000620778 4980 ntBASIC18.82■□□□□ 0.6
PKP3Q9Y446 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP3Q9Y446 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP3Q9Y446 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
PKP3Q9Y446 HEIH-201ENST00000623091 1652 ntBASIC18.82■□□□□ 0.6
PKP3Q9Y446 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PKP3Q9Y446 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP3Q9Y446 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP3Q9Y446 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP3Q9Y446 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP3Q9Y446 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 TSPY14P-201ENST00000303979 915 ntBASIC18.81■□□□□ 0.6
PKP3Q9Y446 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP3Q9Y446 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP3Q9Y446 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 EGLN1P1-201ENST00000531623 762 ntBASIC18.81■□□□□ 0.6
PKP3Q9Y446 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PKP3Q9Y446 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 AL353719.1-201ENST00000566847 864 ntBASIC18.81■□□□□ 0.6
PKP3Q9Y446 AL023803.3-201ENST00000615559 522 ntBASIC18.81■□□□□ 0.6
PKP3Q9Y446 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP3Q9Y446 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP3Q9Y446 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP3Q9Y446 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP3Q9Y446 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PKP3Q9Y446 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PKP3Q9Y446 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PKP3Q9Y446 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PKP3Q9Y446 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP3Q9Y446 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP3Q9Y446 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP3Q9Y446 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.8■□□□□ 0.6
PKP3Q9Y446 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.8■□□□□ 0.6
PKP3Q9Y446 AC008622.2-201ENST00000617006 1229 ntBASIC18.8■□□□□ 0.6
PKP3Q9Y446 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP3Q9Y446 AC068587.9-201ENST00000641814 219 ntBASIC18.8■□□□□ 0.6
PKP3Q9Y446 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP3Q9Y446 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP3Q9Y446 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP3Q9Y446 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PKP3Q9Y446 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.8■□□□□ 0.6
PKP3Q9Y446 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.8■□□□□ 0.6
PKP3Q9Y446 KRT8P9-201ENST00000558927 1449 ntBASIC18.8■□□□□ 0.6
PKP3Q9Y446 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.8■□□□□ 0.6
PKP3Q9Y446 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP3Q9Y446 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP3Q9Y446 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.79■□□□□ 0.6
PKP3Q9Y446 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.79■□□□□ 0.6
PKP3Q9Y446 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 CYP2D8P-201ENST00000433633 1490 ntBASIC18.79■□□□□ 0.6
PKP3Q9Y446 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.79■□□□□ 0.6
PKP3Q9Y446 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.79■□□□□ 0.6
PKP3Q9Y446 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.79■□□□□ 0.6
PKP3Q9Y446 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PKP3Q9Y446 MCCD1P1-208ENST00000445732 328 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms