Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC068880.1-201ENST00000507289 2297 ntBASIC16.72■□□□□ 0.27
COPS3Q9UNS2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 AC104771.1-201ENST00000603335 964 ntBASIC16.72■□□□□ 0.27
COPS3Q9UNS2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 AL499627.1-201ENST00000569373 2188 ntBASIC16.72■□□□□ 0.27
COPS3Q9UNS2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 HEIH-201ENST00000623091 1652 ntBASIC16.72■□□□□ 0.27
COPS3Q9UNS2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPS3Q9UNS2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 ABALON-201ENST00000629058 1903 ntBASIC16.71■□□□□ 0.27
COPS3Q9UNS2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COPS3Q9UNS2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
COPS3Q9UNS2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 RCC2P6-201ENST00000526625 1557 ntBASIC16.7■□□□□ 0.26
COPS3Q9UNS2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 MTMR9LP-203ENST00000426597 1545 ntBASIC16.7■□□□□ 0.26
COPS3Q9UNS2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.7■□□□□ 0.26
COPS3Q9UNS2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.69■□□□□ 0.26
COPS3Q9UNS2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.69■□□□□ 0.26
COPS3Q9UNS2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COPS3Q9UNS2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COPS3Q9UNS2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COPS3Q9UNS2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COPS3Q9UNS2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms