Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 KRT18P41-201ENST00000518924 1277 ntBASIC18.53■□□□□ 0.56
MKS1Q9NXB0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 AC134043.2-201ENST00000624206 2238 ntBASIC18.53■□□□□ 0.56
MKS1Q9NXB0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MKS1Q9NXB0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 AL138781.1-201ENST00000566567 1274 ntBASIC18.52■□□□□ 0.56
MKS1Q9NXB0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.52■□□□□ 0.56
MKS1Q9NXB0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MKS1Q9NXB0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
MKS1Q9NXB0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.55
MKS1Q9NXB0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
MKS1Q9NXB0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MKS1Q9NXB0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MKS1Q9NXB0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 FLJ13224-201ENST00000313737 1514 ntBASIC18.5■□□□□ 0.55
MKS1Q9NXB0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.5■□□□□ 0.55
MKS1Q9NXB0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms