Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 KRT17P3-201ENST00000420566 1262 ntBASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 AC139713.2-201ENST00000641328 2723 ntBASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2LQ9NUG4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2LQ9NUG4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2LQ9NUG4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2LQ9NUG4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2LQ9NUG4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2LQ9NUG4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2LQ9NUG4 KRT8P8-201ENST00000434750 1448 ntBASIC17.83■□□□□ 0.45
CCM2LQ9NUG4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2LQ9NUG4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2LQ9NUG4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2LQ9NUG4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2LQ9NUG4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.83■□□□□ 0.44
CCM2LQ9NUG4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCM2LQ9NUG4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.83■□□□□ 0.44
CCM2LQ9NUG4 HLA-B-256ENST00000639848 1089 ntBASIC17.83■□□□□ 0.44
CCM2LQ9NUG4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCM2LQ9NUG4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCM2LQ9NUG4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 PRORSD1P-202ENST00000563365 2154 ntBASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.82■□□□□ 0.44
CCM2LQ9NUG4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms