Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 AC104640.1-201ENST00000562617 2109 ntBASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 AC007950.2-201ENST00000615045 2347 ntBASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 AC026691.1-201ENST00000602502 2017 ntBASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42SE1Q9NRR8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 PCDHA14-201ENST00000506751 2298 ntBASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
CDC42SE1Q9NRR8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42SE1Q9NRR8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms