Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 SEC1P-202ENST00000473944 940 ntBASIC19.37■□□□□ 0.69
HPS4Q9NQG7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.37■□□□□ 0.69
HPS4Q9NQG7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 AC092119.3-201ENST00000612618 583 ntBASIC19.36■□□□□ 0.69
HPS4Q9NQG7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.36■□□□□ 0.69
HPS4Q9NQG7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 AC079602.3-201ENST00000623931 403 ntBASIC19.35■□□□□ 0.69
HPS4Q9NQG7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HPS4Q9NQG7 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.35■□□□□ 0.69
HPS4Q9NQG7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 TPM4P1-201ENST00000436100 807 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms