Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC034232.1-201ENST00000506026 1064 ntBASIC18.74■□□□□ 0.59
TM9SF3Q9HD45 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.74■□□□□ 0.59
TM9SF3Q9HD45 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TM9SF3Q9HD45 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF3Q9HD45 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.74■□□□□ 0.59
TM9SF3Q9HD45 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF3Q9HD45 AC005332.7-201ENST00000614046 2005 ntBASIC18.74■□□□□ 0.59
TM9SF3Q9HD45 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.74■□□□□ 0.59
TM9SF3Q9HD45 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF3Q9HD45 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF3Q9HD45 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TM9SF3Q9HD45 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 AC092597.1-201ENST00000487352 616 ntBASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 TNXA-203ENST00000507684 2038 ntBASIC18.73■□□□□ 0.59
TM9SF3Q9HD45 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 AL645929.1-201ENST00000420084 975 ntBASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF3Q9HD45 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 AL023284.2-201ENST00000405850 579 ntBASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 AC024243.1-201ENST00000609234 778 ntBASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 AC012313.10-201ENST00000623509 926 ntBASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.71■□□□□ 0.59
TM9SF3Q9HD45 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms