Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CSNK1G1Q9HCP0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G1Q9HCP0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G1Q9HCP0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G1Q9HCP0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G1Q9HCP0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CSNK1G1Q9HCP0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G1Q9HCP0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 AC093525.10-201ENST00000625130 1569 ntBASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 ARMC10P1-201ENST00000313754 855 ntBASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 AC010240.3-201ENST00000607688 395 ntBASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 KRT8P50-201ENST00000562022 1438 ntBASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1G1Q9HCP0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CSNK1G1Q9HCP0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CSNK1G1Q9HCP0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CSNK1G1Q9HCP0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.58■□□□□ 0.73
CSNK1G1Q9HCP0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CSNK1G1Q9HCP0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CSNK1G1Q9HCP0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.58■□□□□ 0.73
CSNK1G1Q9HCP0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.58■□□□□ 0.73
CSNK1G1Q9HCP0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.58■□□□□ 0.73
CSNK1G1Q9HCP0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.58■□□□□ 0.72
CSNK1G1Q9HCP0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.58■□□□□ 0.72
CSNK1G1Q9HCP0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.58■□□□□ 0.72
CSNK1G1Q9HCP0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G1Q9HCP0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.58■□□□□ 0.72
CSNK1G1Q9HCP0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G1Q9HCP0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G1Q9HCP0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G1Q9HCP0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G1Q9HCP0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.58■□□□□ 0.72
CSNK1G1Q9HCP0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G1Q9HCP0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 AC112907.2-201ENST00000448639 330 ntBASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 AL671277.2-201ENST00000458060 996 ntBASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 AC087388.1-201ENST00000571370 1112 ntBASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 AL157888.1-201ENST00000631930 593 ntBASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CSNK1G1Q9HCP0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 AP000593.1-201ENST00000393668 712 ntBASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.56■□□□□ 0.72
CSNK1G1Q9HCP0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms