Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 KRT18P23-201ENST00000435622 1283 ntBASIC19.55■□□□□ 0.72
LRRC3Q9BY71 AP002383.4-201ENST00000442518 975 ntBASIC19.55■□□□□ 0.72
LRRC3Q9BY71 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 KRT8P7-201ENST00000533003 1432 ntBASIC19.55■□□□□ 0.72
LRRC3Q9BY71 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 AL136038.4-201ENST00000603606 1261 ntBASIC19.55■□□□□ 0.72
LRRC3Q9BY71 AC092119.3-201ENST00000612618 583 ntBASIC19.55■□□□□ 0.72
LRRC3Q9BY71 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 TSSC2-201ENST00000450217 709 ntBASIC19.54■□□□□ 0.72
LRRC3Q9BY71 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC3Q9BY71 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 AC141586.3-201ENST00000562166 1838 ntBASIC19.53■□□□□ 0.72
LRRC3Q9BY71 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC3Q9BY71 AC093525.10-201ENST00000625130 1569 ntBASIC19.53■□□□□ 0.72
LRRC3Q9BY71 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 FP475955.4-201ENST00000623131 1990 ntBASIC19.52■□□□□ 0.72
LRRC3Q9BY71 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 AC010240.3-201ENST00000607688 395 ntBASIC19.52■□□□□ 0.72
LRRC3Q9BY71 AL121672.3-201ENST00000608644 468 ntBASIC19.52■□□□□ 0.72
LRRC3Q9BY71 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC3Q9BY71 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC3Q9BY71 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC3Q9BY71 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC3Q9BY71 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC3Q9BY71 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
LRRC3Q9BY71 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms