Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 KRT18P41-201ENST00000518924 1277 ntBASIC18.62■□□□□ 0.57
HDAC8Q9BY41 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC8Q9BY41 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 AC116562.4-201ENST00000641316 2276 ntBASIC18.61■□□□□ 0.57
HDAC8Q9BY41 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.61■□□□□ 0.57
HDAC8Q9BY41 AC069148.1-201ENST00000608741 768 ntBASIC18.61■□□□□ 0.57
HDAC8Q9BY41 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC8Q9BY41 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 AL049812.1-201ENST00000432563 2267 ntBASIC18.6■□□□□ 0.57
HDAC8Q9BY41 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 MIR662-201ENST00000384847 95 ntBASIC18.6■□□□□ 0.57
HDAC8Q9BY41 PVRIG2P-201ENST00000435460 978 ntBASIC18.6■□□□□ 0.57
HDAC8Q9BY41 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC8Q9BY41 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.59■□□□□ 0.57
HDAC8Q9BY41 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 AP000593.1-201ENST00000393668 712 ntBASIC18.59■□□□□ 0.57
HDAC8Q9BY41 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.59■□□□□ 0.57
HDAC8Q9BY41 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms