Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 AC112907.2-201ENST00000448639 330 ntBASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM47Q9BQJ4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 Z98044.1-201ENST00000632503 1764 ntBASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 AL671277.2-201ENST00000458060 996 ntBASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 RASA4DP-201ENST00000460726 1199 ntBASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 KRT8P7-201ENST00000533003 1432 ntBASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM47Q9BQJ4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TMEM47Q9BQJ4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 AC104390.1-201ENST00000555663 520 ntBASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 AL157888.1-201ENST00000631930 593 ntBASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TMEM47Q9BQJ4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TMEM47Q9BQJ4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TMEM47Q9BQJ4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
TMEM47Q9BQJ4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 AC092597.1-201ENST00000487352 616 ntBASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 AC083849.1-201ENST00000615227 514 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms