Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
VRK1Q99986 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.55■□□□□ 0.24
VRK1Q99986 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK1Q99986 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
VRK1Q99986 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.54■□□□□ 0.24
VRK1Q99986 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 AC018470.1-201ENST00000624790 3129 ntBASIC16.54■□□□□ 0.24
VRK1Q99986 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 CRYGFP-201ENST00000418459 633 ntBASIC16.54■□□□□ 0.24
VRK1Q99986 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
VRK1Q99986 B3GAT3P1-201ENST00000471720 806 ntBASIC16.54■□□□□ 0.24
VRK1Q99986 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
VRK1Q99986 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.54■□□□□ 0.24
VRK1Q99986 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.54■□□□□ 0.24
VRK1Q99986 FITM1-202ENST00000559294 800 ntBASIC16.54■□□□□ 0.24
VRK1Q99986 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.54■□□□□ 0.24
VRK1Q99986 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.54■□□□□ 0.24
VRK1Q99986 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.54■□□□□ 0.24
VRK1Q99986 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.54■□□□□ 0.24
VRK1Q99986 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
VRK1Q99986 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.54■□□□□ 0.24
VRK1Q99986 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
VRK1Q99986 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.54■□□□□ 0.24
VRK1Q99986 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
VRK1Q99986 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK1Q99986 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.53■□□□□ 0.24
VRK1Q99986 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.53■□□□□ 0.24
VRK1Q99986 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.53■□□□□ 0.24
VRK1Q99986 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
VRK1Q99986 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.53■□□□□ 0.24
VRK1Q99986 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.53■□□□□ 0.24
VRK1Q99986 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
VRK1Q99986 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.53■□□□□ 0.24
VRK1Q99986 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.53■□□□□ 0.24
VRK1Q99986 AC011506.1-201ENST00000474329 610 ntBASIC16.53■□□□□ 0.24
VRK1Q99986 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 AC097488.1-201ENST00000507834 756 ntBASIC16.53■□□□□ 0.24
VRK1Q99986 SLC25A1P4-201ENST00000567977 778 ntBASIC16.53■□□□□ 0.24
VRK1Q99986 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.53■□□□□ 0.24
VRK1Q99986 AC012306.2-201ENST00000609350 630 ntBASIC16.53■□□□□ 0.24
VRK1Q99986 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 HLA-A-209ENST00000638375 975 ntBASIC16.53■□□□□ 0.24
VRK1Q99986 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 AC020916.1-201ENST00000587762 1774 ntBASIC16.53■□□□□ 0.24
VRK1Q99986 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.53■□□□□ 0.24
VRK1Q99986 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK1Q99986 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
VRK1Q99986 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
VRK1Q99986 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK1Q99986 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK1Q99986 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK1Q99986 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.52■□□□□ 0.24
VRK1Q99986 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK1Q99986 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
VRK1Q99986 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.52■□□□□ 0.24
VRK1Q99986 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK1Q99986 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
VRK1Q99986 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.52■□□□□ 0.24
VRK1Q99986 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK1Q99986 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.52■□□□□ 0.24
VRK1Q99986 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.52■□□□□ 0.24
VRK1Q99986 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.52■□□□□ 0.24
VRK1Q99986 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VRK1Q99986 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.52■□□□□ 0.24
VRK1Q99986 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.52■□□□□ 0.24
VRK1Q99986 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms