Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEMA3CQ99985 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEMA3CQ99985 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.02■□□□□ 0.64
SEMA3CQ99985 AC145285.6-201ENST00000604632 637 ntBASIC19.02■□□□□ 0.64
SEMA3CQ99985 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
SEMA3CQ99985 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SEMA3CQ99985 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEMA3CQ99985 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SEMA3CQ99985 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.02■□□□□ 0.63
SEMA3CQ99985 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SEMA3CQ99985 KRT18P22-201ENST00000402024 1347 ntBASIC19.01■□□□□ 0.63
SEMA3CQ99985 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA3CQ99985 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA3CQ99985 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.01■□□□□ 0.63
SEMA3CQ99985 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA3CQ99985 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.01■□□□□ 0.63
SEMA3CQ99985 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.01■□□□□ 0.63
SEMA3CQ99985 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.01■□□□□ 0.63
SEMA3CQ99985 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA3CQ99985 FAM87A-204ENST00000613235 858 ntBASIC19.01■□□□□ 0.63
SEMA3CQ99985 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SEMA3CQ99985 AC093525.10-201ENST00000625130 1569 ntBASIC19.01■□□□□ 0.63
SEMA3CQ99985 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SEMA3CQ99985 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SEMA3CQ99985 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19■□□□□ 0.63
SEMA3CQ99985 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19■□□□□ 0.63
SEMA3CQ99985 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19■□□□□ 0.63
SEMA3CQ99985 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 GXYLT1P6-201ENST00000456472 1187 ntBASIC19■□□□□ 0.63
SEMA3CQ99985 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SEMA3CQ99985 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19■□□□□ 0.63
SEMA3CQ99985 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 AL031598.1-201ENST00000561511 1773 ntBASIC19■□□□□ 0.63
SEMA3CQ99985 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
SEMA3CQ99985 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19■□□□□ 0.63
SEMA3CQ99985 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19■□□□□ 0.63
SEMA3CQ99985 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3CQ99985 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.99■□□□□ 0.63
SEMA3CQ99985 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3CQ99985 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3CQ99985 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SEMA3CQ99985 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA3CQ99985 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SEMA3CQ99985 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.99■□□□□ 0.63
SEMA3CQ99985 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3CQ99985 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3CQ99985 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.99■□□□□ 0.63
SEMA3CQ99985 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.99■□□□□ 0.63
SEMA3CQ99985 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3CQ99985 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3CQ99985 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3CQ99985 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3CQ99985 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3CQ99985 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA3CQ99985 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.99■□□□□ 0.63
SEMA3CQ99985 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.98■□□□□ 0.63
SEMA3CQ99985 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3CQ99985 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.98■□□□□ 0.63
SEMA3CQ99985 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3CQ99985 AL357033.4-201ENST00000617703 1807 ntBASIC18.98■□□□□ 0.63
SEMA3CQ99985 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SEMA3CQ99985 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3CQ99985 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SEMA3CQ99985 TMPOP1-202ENST00000424642 1267 ntBASIC18.98■□□□□ 0.63
SEMA3CQ99985 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3CQ99985 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3CQ99985 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SEMA3CQ99985 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3CQ99985 Z98044.1-201ENST00000632503 1764 ntBASIC18.98■□□□□ 0.63
SEMA3CQ99985 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3CQ99985 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3CQ99985 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.98■□□□□ 0.63
SEMA3CQ99985 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3CQ99985 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SEMA3CQ99985 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3CQ99985 AC036111.1-201ENST00000533973 1582 ntBASIC18.98■□□□□ 0.63
SEMA3CQ99985 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SEMA3CQ99985 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3CQ99985 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.97■□□□□ 0.63
SEMA3CQ99985 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.97■□□□□ 0.63
SEMA3CQ99985 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.97■□□□□ 0.63
SEMA3CQ99985 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SEMA3CQ99985 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3CQ99985 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3CQ99985 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SEMA3CQ99985 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.97■□□□□ 0.63
SEMA3CQ99985 HMGA1P5-201ENST00000412453 271 ntBASIC18.97■□□□□ 0.63
SEMA3CQ99985 MIR3180-5-201ENST00000583743 153 ntBASIC18.97■□□□□ 0.63
SEMA3CQ99985 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms