Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL109659.2-201ENST00000606809 1674 ntBASIC18.24■□□□□ 0.51
PKP4Q99569 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PKP4Q99569 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PKP4Q99569 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.23■□□□□ 0.51
PKP4Q99569 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PKP4Q99569 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.23■□□□□ 0.51
PKP4Q99569 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PKP4Q99569 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.23■□□□□ 0.51
PKP4Q99569 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.23■□□□□ 0.51
PKP4Q99569 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.23■□□□□ 0.51
PKP4Q99569 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PKP4Q99569 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PKP4Q99569 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.23■□□□□ 0.51
PKP4Q99569 AL357033.4-201ENST00000617703 1807 ntBASIC18.23■□□□□ 0.51
PKP4Q99569 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PKP4Q99569 ANO7L1-203ENST00000602586 1720 ntBASIC18.23■□□□□ 0.51
PKP4Q99569 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PKP4Q99569 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.23■□□□□ 0.51
PKP4Q99569 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.23■□□□□ 0.51
PKP4Q99569 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.22■□□□□ 0.51
PKP4Q99569 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
PKP4Q99569 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PKP4Q99569 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.22■□□□□ 0.51
PKP4Q99569 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.22■□□□□ 0.51
PKP4Q99569 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.22■□□□□ 0.51
PKP4Q99569 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.22■□□□□ 0.51
PKP4Q99569 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.22■□□□□ 0.51
PKP4Q99569 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.22■□□□□ 0.51
PKP4Q99569 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PKP4Q99569 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PKP4Q99569 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.22■□□□□ 0.51
PKP4Q99569 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PKP4Q99569 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PKP4Q99569 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PKP4Q99569 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PKP4Q99569 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
PKP4Q99569 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.21■□□□□ 0.51
PKP4Q99569 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PKP4Q99569 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PKP4Q99569 AC138932.1-201ENST00000534164 6830 ntBASIC18.21■□□□□ 0.51
PKP4Q99569 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 LINC01568-207ENST00000641790 1380 ntBASIC18.21■□□□□ 0.51
PKP4Q99569 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PKP4Q99569 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.21■□□□□ 0.51
PKP4Q99569 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.21■□□□□ 0.51
PKP4Q99569 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 ECEL1P2-202ENST00000465689 757 ntBASIC18.21■□□□□ 0.51
PKP4Q99569 AC128688.1-201ENST00000487626 519 ntBASIC18.21■□□□□ 0.51
PKP4Q99569 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
PKP4Q99569 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.21■□□□□ 0.51
PKP4Q99569 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.21■□□□□ 0.51
PKP4Q99569 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PKP4Q99569 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.21■□□□□ 0.51
PKP4Q99569 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PKP4Q99569 AL138781.2-201ENST00000617896 1843 ntBASIC18.21■□□□□ 0.51
PKP4Q99569 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PKP4Q99569 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PKP4Q99569 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
PKP4Q99569 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms