Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC068587.9-201ENST00000641814 219 ntBASIC19.32■□□□□ 0.68
NOTCH4Q99466 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH4Q99466 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH4Q99466 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.32■□□□□ 0.68
NOTCH4Q99466 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 KRT8P50-201ENST00000562022 1438 ntBASIC19.32■□□□□ 0.68
NOTCH4Q99466 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH4Q99466 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 IGHGP-201ENST00000390555 1178 ntBASIC19.32■□□□□ 0.68
NOTCH4Q99466 MRPL3P1-201ENST00000400109 1033 ntBASIC19.32■□□□□ 0.68
NOTCH4Q99466 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 IGHV3-47-201ENST00000425060 335 ntBASIC19.32■□□□□ 0.68
NOTCH4Q99466 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 AP002469.2-201ENST00000531724 424 ntBASIC19.32■□□□□ 0.68
NOTCH4Q99466 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH4Q99466 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH4Q99466 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NOTCH4Q99466 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH4Q99466 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.31■□□□□ 0.68
NOTCH4Q99466 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.31■□□□□ 0.68
NOTCH4Q99466 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NOTCH4Q99466 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NOTCH4Q99466 KRT16P4-201ENST00000453883 522 ntBASIC19.31■□□□□ 0.68
NOTCH4Q99466 FOSL1P1-201ENST00000511041 816 ntBASIC19.31■□□□□ 0.68
NOTCH4Q99466 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.31■□□□□ 0.68
NOTCH4Q99466 AC024563.2-201ENST00000603282 481 ntBASIC19.31■□□□□ 0.68
NOTCH4Q99466 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 KRT89P-201ENST00000620027 1478 ntBASIC19.31■□□□□ 0.68
NOTCH4Q99466 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NOTCH4Q99466 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NOTCH4Q99466 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH4Q99466 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH4Q99466 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH4Q99466 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH4Q99466 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 AP003733.1-201ENST00000491725 852 ntBASIC19.3■□□□□ 0.68
NOTCH4Q99466 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH4Q99466 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 AL357033.4-201ENST00000617703 1807 ntBASIC19.3■□□□□ 0.68
NOTCH4Q99466 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH4Q99466 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH4Q99466 AKR1C7P-201ENST00000305623 895 ntBASIC19.3■□□□□ 0.68
NOTCH4Q99466 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH4Q99466 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH4Q99466 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH4Q99466 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NOTCH4Q99466 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NOTCH4Q99466 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.29■□□□□ 0.68
NOTCH4Q99466 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
NOTCH4Q99466 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NOTCH4Q99466 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 AC099336.1-202ENST00000602961 463 ntBASIC19.29■□□□□ 0.68
NOTCH4Q99466 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.29■□□□□ 0.68
NOTCH4Q99466 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.29■□□□□ 0.68
NOTCH4Q99466 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.29■□□□□ 0.68
NOTCH4Q99466 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NOTCH4Q99466 RNA5SP419-201ENST00000515908 135 ntBASIC19.29■□□□□ 0.68
NOTCH4Q99466 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH4Q99466 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.29■□□□□ 0.68
NOTCH4Q99466 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms