Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 VN2R19P-201ENST00000442399 1052 ntBASIC5.7□□□□□ -1.5
HMCN1Q96RW7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 AC004835.2-201ENST00000603762 682 ntBASIC5.7□□□□□ -1.5
HMCN1Q96RW7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 AC021087.4-201ENST00000563761 564 ntBASIC5.7□□□□□ -1.5
HMCN1Q96RW7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 LAGE3P1-201ENST00000425356 484 ntBASIC5.7□□□□□ -1.5
HMCN1Q96RW7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 GPR32P1-201ENST00000601788 811 ntBASIC5.7□□□□□ -1.5
HMCN1Q96RW7 MIR2861-201ENST00000636310 90 ntBASIC5.7□□□□□ -1.5
HMCN1Q96RW7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMCN1Q96RW7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 AL160286.2-201ENST00000567150 934 ntBASIC5.69□□□□□ -1.5
HMCN1Q96RW7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC5.69□□□□□ -1.5
HMCN1Q96RW7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms