Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 KRT18P11-201ENST00000435214 1283 ntBASIC14.17□□□□□ -0.14
AP1S3Q96PC3 RARRES2P4-201ENST00000514074 484 ntBASIC14.17□□□□□ -0.14
AP1S3Q96PC3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.17□□□□□ -0.14
AP1S3Q96PC3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S3Q96PC3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 SBF1P1-201ENST00000444527 5631 ntBASIC14.16□□□□□ -0.14
AP1S3Q96PC3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 KRT18P68-201ENST00000392293 1000 ntBASIC14.16□□□□□ -0.14
AP1S3Q96PC3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 AC023632.3-201ENST00000521633 145 ntBASIC14.16□□□□□ -0.14
AP1S3Q96PC3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.16□□□□□ -0.14
AP1S3Q96PC3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 AC139713.2-201ENST00000641328 2723 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms