Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC46A1Q96NT5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC46A1Q96NT5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC46A1Q96NT5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC46A1Q96NT5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC46A1Q96NT5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC46A1Q96NT5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC46A1Q96NT5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC46A1Q96NT5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 Z82202.1-201ENST00000623446 1880 ntBASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 CHCHD2P8-201ENST00000429873 447 ntBASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 AP000347.1-202ENST00000435868 847 ntBASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
SLC46A1Q96NT5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 AL023284.2-201ENST00000405850 579 ntBASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 HLA-F-220ENST00000434407 884 ntBASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 AC093525.10-201ENST00000625130 1569 ntBASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC46A1Q96NT5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms