Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS50Q96JG6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VPS50Q96JG6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS50Q96JG6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS50Q96JG6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS50Q96JG6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS50Q96JG6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS50Q96JG6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS50Q96JG6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS50Q96JG6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS50Q96JG6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS50Q96JG6 KRT18P16-201ENST00000510337 1294 ntBASIC18.34■□□□□ 0.53
VPS50Q96JG6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.34■□□□□ 0.53
VPS50Q96JG6 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.34■□□□□ 0.53
VPS50Q96JG6 AC133561.5-201ENST00000635547 218 ntBASIC18.34■□□□□ 0.53
VPS50Q96JG6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS50Q96JG6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS50Q96JG6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VPS50Q96JG6 PCDHB18P-201ENST00000524813 2368 ntBASIC18.34■□□□□ 0.53
VPS50Q96JG6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS50Q96JG6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS50Q96JG6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS50Q96JG6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS50Q96JG6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS50Q96JG6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VPS50Q96JG6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
VPS50Q96JG6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS50Q96JG6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS50Q96JG6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS50Q96JG6 AC009113.1-201ENST00000570267 2443 ntBASIC18.33■□□□□ 0.53
VPS50Q96JG6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS50Q96JG6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VPS50Q96JG6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VPS50Q96JG6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.33■□□□□ 0.53
VPS50Q96JG6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.33■□□□□ 0.53
VPS50Q96JG6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
VPS50Q96JG6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS50Q96JG6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VPS50Q96JG6 AC087499.1-201ENST00000418141 1075 ntBASIC18.33■□□□□ 0.52
VPS50Q96JG6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VPS50Q96JG6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS50Q96JG6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VPS50Q96JG6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
VPS50Q96JG6 AL445675.2-201ENST00000620291 557 ntBASIC18.33■□□□□ 0.52
VPS50Q96JG6 AC131212.4-201ENST00000623606 975 ntBASIC18.33■□□□□ 0.52
VPS50Q96JG6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS50Q96JG6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS50Q96JG6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS50Q96JG6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
VPS50Q96JG6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.33■□□□□ 0.52
VPS50Q96JG6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS50Q96JG6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VPS50Q96JG6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VPS50Q96JG6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS50Q96JG6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS50Q96JG6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS50Q96JG6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS50Q96JG6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS50Q96JG6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.32■□□□□ 0.52
VPS50Q96JG6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS50Q96JG6 FSCN1P1-201ENST00000568912 1481 ntBASIC18.32■□□□□ 0.52
VPS50Q96JG6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VPS50Q96JG6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS50Q96JG6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS50Q96JG6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
VPS50Q96JG6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS50Q96JG6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS50Q96JG6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VPS50Q96JG6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS50Q96JG6 AL161938.1-201ENST00000569833 2180 ntBASIC18.31■□□□□ 0.52
VPS50Q96JG6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS50Q96JG6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.31■□□□□ 0.52
VPS50Q96JG6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS50Q96JG6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS50Q96JG6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS50Q96JG6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS50Q96JG6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
VPS50Q96JG6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms