Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.3■□□□□ 0.84
PGBD4Q96DM1 MIR3917-201ENST00000580971 93 ntBASIC20.3■□□□□ 0.84
PGBD4Q96DM1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.3■□□□□ 0.84
PGBD4Q96DM1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.3■□□□□ 0.84
PGBD4Q96DM1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.3■□□□□ 0.84
PGBD4Q96DM1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PGBD4Q96DM1 AC008556.1-201ENST00000610908 2040 ntBASIC20.3■□□□□ 0.84
PGBD4Q96DM1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD4Q96DM1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PGBD4Q96DM1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD4Q96DM1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
PGBD4Q96DM1 FP475955.4-201ENST00000623131 1990 ntBASIC20.3■□□□□ 0.84
PGBD4Q96DM1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD4Q96DM1 AC141586.3-201ENST00000562166 1838 ntBASIC20.3■□□□□ 0.84
PGBD4Q96DM1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 KRT8P32-201ENST00000512863 1461 ntBASIC20.29■□□□□ 0.84
PGBD4Q96DM1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PGBD4Q96DM1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 HOXB1-202ENST00000577092 1414 ntBASIC20.28■□□□□ 0.84
PGBD4Q96DM1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 MIR564-202ENST00000385049 94 ntBASIC20.28■□□□□ 0.84
PGBD4Q96DM1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 KRT18P48-201ENST00000434763 852 ntBASIC20.28■□□□□ 0.84
PGBD4Q96DM1 HCG4P8-203ENST00000443049 980 ntBASIC20.28■□□□□ 0.84
PGBD4Q96DM1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.28■□□□□ 0.84
PGBD4Q96DM1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 AL157888.1-201ENST00000631930 593 ntBASIC20.28■□□□□ 0.84
PGBD4Q96DM1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.28■□□□□ 0.84
PGBD4Q96DM1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.27■□□□□ 0.84
PGBD4Q96DM1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PGBD4Q96DM1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD4Q96DM1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGBD4Q96DM1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms