Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 AC073592.3-201ENST00000625118 1834 ntBASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTHRC1Q96CG8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 AP000593.1-201ENST00000393668 712 ntBASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTHRC1Q96CG8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 SLC25A3P1-201ENST00000443844 931 ntBASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 KRT8P50-201ENST00000562022 1438 ntBASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.34■□□□□ 0.37
CTHRC1Q96CG8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTHRC1Q96CG8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTHRC1Q96CG8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTHRC1Q96CG8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTHRC1Q96CG8 AC126763.1-201ENST00000552015 2118 ntBASIC17.33■□□□□ 0.37
CTHRC1Q96CG8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTHRC1Q96CG8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.33■□□□□ 0.37
CTHRC1Q96CG8 MYLKP1-201ENST00000509077 1580 ntBASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms