Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDF1Q96CC6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDF1Q96CC6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDF1Q96CC6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDF1Q96CC6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 AC008622.2-201ENST00000617006 1229 ntBASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 AL357033.4-201ENST00000617703 1807 ntBASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDF1Q96CC6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.27■□□□□ 0.51
RHBDF1Q96CC6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RHBDF1Q96CC6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RHBDF1Q96CC6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.27■□□□□ 0.51
RHBDF1Q96CC6 AC026471.1-201ENST00000564629 3026 ntBASIC18.27■□□□□ 0.51
RHBDF1Q96CC6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RHBDF1Q96CC6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 AC007613.1-201ENST00000572811 2597 ntBASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 AL499627.1-201ENST00000569373 2188 ntBASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 MIR718-201ENST00000390190 70 ntBASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 AP003071.4-201ENST00000562276 1284 ntBASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDF1Q96CC6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 AC126763.1-201ENST00000552015 2118 ntBASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.25■□□□□ 0.51
RHBDF1Q96CC6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms