Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 AL109659.2-201ENST00000606809 1674 ntBASIC16.82■□□□□ 0.28
CPNE4Q96A23 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 RCC2P3-201ENST00000418112 1537 ntBASIC16.82■□□□□ 0.28
CPNE4Q96A23 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 AP000523.1-201ENST00000398242 1049 ntBASIC16.82■□□□□ 0.28
CPNE4Q96A23 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 AC010203.1-204ENST00000548782 407 ntBASIC16.82■□□□□ 0.28
CPNE4Q96A23 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 MIR4674-201ENST00000582457 87 ntBASIC16.82■□□□□ 0.28
CPNE4Q96A23 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE4Q96A23 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CPNE4Q96A23 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 AC073508.3-201ENST00000619697 1419 ntBASIC16.81■□□□□ 0.28
CPNE4Q96A23 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE4Q96A23 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE4Q96A23 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 RCN1P1-201ENST00000400413 996 ntBASIC16.81■□□□□ 0.28
CPNE4Q96A23 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CPNE4Q96A23 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CPNE4Q96A23 WWOX-216ENST00000569818 525 ntBASIC16.81■□□□□ 0.28
CPNE4Q96A23 MIR3180-5-201ENST00000583743 153 ntBASIC16.81■□□□□ 0.28
CPNE4Q96A23 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CPNE4Q96A23 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE4Q96A23 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CPNE4Q96A23 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE4Q96A23 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE4Q96A23 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE4Q96A23 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 KRT8P45-201ENST00000414328 1447 ntBASIC16.8■□□□□ 0.28
CPNE4Q96A23 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 FAM210CP-201ENST00000445714 574 ntBASIC16.8■□□□□ 0.28
CPNE4Q96A23 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CPNE4Q96A23 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE4Q96A23 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms