Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RNF165-205ENST00000588679 2904 ntBASIC20.98■□□□□ 0.95
ATP6V0A1Q93050 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 HCG4P8-203ENST00000443049 980 ntBASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 KRT126P-201ENST00000549467 1181 ntBASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0A1Q93050 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 AC008556.1-201ENST00000610908 2040 ntBASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.96■□□□□ 0.95
ATP6V0A1Q93050 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP6V0A1Q93050 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0A1Q93050 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms