Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 AC083906.6-201ENST00000641366 219 ntBASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 AC104417.2-201ENST00000562989 1793 ntBASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 FEM1AP3-201ENST00000403722 1741 ntBASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB40AQ8WXH6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 AC239809.2-201ENST00000415381 517 ntBASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 AL023875.1-201ENST00000640777 796 ntBASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAB40AQ8WXH6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 SDHAP1-207ENST00000440850 2000 ntBASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 AC073592.3-201ENST00000625118 1834 ntBASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms