Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 MIR4767-201ENST00000582827 78 ntBASIC12.68□□□□□ -0.38
COPS9Q8WXC6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS9Q8WXC6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.67□□□□□ -0.38
COPS9Q8WXC6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 SLC7A5P1-201ENST00000568957 537 ntBASIC12.67□□□□□ -0.38
COPS9Q8WXC6 SRR-208ENST00000576848 588 ntTSL 4 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS9Q8WXC6 LINC00896-202ENST00000609602 2128 ntBASIC12.67□□□□□ -0.38
COPS9Q8WXC6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS9Q8WXC6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS9Q8WXC6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS9Q8WXC6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.66□□□□□ -0.38
COPS9Q8WXC6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
COPS9Q8WXC6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS9Q8WXC6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms