Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 KRT8P3-201ENST00000519669 1449 ntBASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC44A1Q8WWI5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 AC112777.1-201ENST00000540175 1423 ntBASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC44A1Q8WWI5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 AL357033.4-201ENST00000617703 1807 ntBASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 KRT8P45-201ENST00000414328 1447 ntBASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC44A1Q8WWI5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC44A1Q8WWI5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms