Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 AP001269.4-201ENST00000609611 512 ntBASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHMP7Q8WUX9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC30.39■■■□□ 2.45
CHMP7Q8WUX9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
CHMP7Q8WUX9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CHMP7Q8WUX9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CHMP7Q8WUX9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CHMP7Q8WUX9 AC006333.2-201ENST00000607957 2099 ntBASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 DDT-203ENST00000403754 569 ntTSL 3 BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHMP7Q8WUX9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 AC034236.2-201ENST00000606662 1610 ntBASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 AC040169.1-201ENST00000565382 521 ntBASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CHMP7Q8WUX9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 AC021087.4-201ENST00000563761 564 ntBASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 Z83851.2-201ENST00000609564 659 ntBASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC30.36■■■□□ 2.45
CHMP7Q8WUX9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 AL512408.1-201ENST00000569378 2000 ntBASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 LBH-203ENST00000404397 543 ntTSL 4 BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 DNAJB3-202ENST00000449667 1266 ntBASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP7Q8WUX9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC30.34■■■□□ 2.45
CHMP7Q8WUX9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHMP7Q8WUX9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHMP7Q8WUX9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CHMP7Q8WUX9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHMP7Q8WUX9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
CHMP7Q8WUX9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC30.34■■■□□ 2.45
CHMP7Q8WUX9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC30.34■■■□□ 2.45
CHMP7Q8WUX9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
CHMP7Q8WUX9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC30.34■■■□□ 2.45
CHMP7Q8WUX9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 KATNBL1P6-202ENST00000562413 1466 ntBASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 TP73-AS1-210ENST00000637775 1455 ntBASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 RPS2P1-201ENST00000434010 821 ntBASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 AC092910.1-201ENST00000482027 1129 ntBASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 RNA5SP415-201ENST00000517246 115 ntBASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC30.33■■■□□ 2.45
CHMP7Q8WUX9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms