Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDM1BQ8NB78 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
KDM1BQ8NB78 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
KDM1BQ8NB78 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDM1BQ8NB78 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDM1BQ8NB78 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.15■□□□□ 0.66
KDM1BQ8NB78 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KDM1BQ8NB78 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDM1BQ8NB78 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.15■□□□□ 0.66
KDM1BQ8NB78 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
KDM1BQ8NB78 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KDM1BQ8NB78 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
KDM1BQ8NB78 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
KDM1BQ8NB78 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KDM1BQ8NB78 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 FEM1AP3-201ENST00000403722 1741 ntBASIC19.14■□□□□ 0.65
KDM1BQ8NB78 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KDM1BQ8NB78 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 STARP1-201ENST00000397973 869 ntBASIC19.13■□□□□ 0.65
KDM1BQ8NB78 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 MCCD1P1-208ENST00000445732 328 ntBASIC19.13■□□□□ 0.65
KDM1BQ8NB78 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 MIR3180-5-201ENST00000583743 153 ntBASIC19.13■□□□□ 0.65
KDM1BQ8NB78 AL121956.5-201ENST00000625261 221 ntBASIC19.13■□□□□ 0.65
KDM1BQ8NB78 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
KDM1BQ8NB78 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.12■□□□□ 0.65
KDM1BQ8NB78 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 AC091076.1-201ENST00000610741 619 ntBASIC19.12■□□□□ 0.65
KDM1BQ8NB78 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KDM1BQ8NB78 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
KDM1BQ8NB78 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM1BQ8NB78 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM1BQ8NB78 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDM1BQ8NB78 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms