Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP38Q8NB14 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP38Q8NB14 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.92■□□□□ 0.94
USP38Q8NB14 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP38Q8NB14 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP38Q8NB14 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP38Q8NB14 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP38Q8NB14 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
USP38Q8NB14 AC104417.2-201ENST00000562989 1793 ntBASIC20.92■□□□□ 0.94
USP38Q8NB14 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP38Q8NB14 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP38Q8NB14 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
USP38Q8NB14 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.92■□□□□ 0.94
USP38Q8NB14 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP38Q8NB14 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP38Q8NB14 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP38Q8NB14 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP38Q8NB14 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP38Q8NB14 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP38Q8NB14 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP38Q8NB14 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP38Q8NB14 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP38Q8NB14 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.91■□□□□ 0.94
USP38Q8NB14 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP38Q8NB14 AC111152.3-201ENST00000569699 673 ntBASIC20.91■□□□□ 0.94
USP38Q8NB14 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.91■□□□□ 0.94
USP38Q8NB14 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.91■□□□□ 0.94
USP38Q8NB14 NPAP1P7-201ENST00000613027 823 ntBASIC20.91■□□□□ 0.94
USP38Q8NB14 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.91■□□□□ 0.94
USP38Q8NB14 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP38Q8NB14 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP38Q8NB14 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP38Q8NB14 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.9■□□□□ 0.94
USP38Q8NB14 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.9■□□□□ 0.94
USP38Q8NB14 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP38Q8NB14 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP38Q8NB14 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP38Q8NB14 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
USP38Q8NB14 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP38Q8NB14 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP38Q8NB14 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.9■□□□□ 0.94
USP38Q8NB14 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
USP38Q8NB14 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.9■□□□□ 0.94
USP38Q8NB14 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.9■□□□□ 0.94
USP38Q8NB14 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.9■□□□□ 0.94
USP38Q8NB14 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.9■□□□□ 0.94
USP38Q8NB14 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP38Q8NB14 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.9■□□□□ 0.94
USP38Q8NB14 AC083849.1-201ENST00000615227 514 ntBASIC20.9■□□□□ 0.94
USP38Q8NB14 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.9■□□□□ 0.94
USP38Q8NB14 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.9■□□□□ 0.94
USP38Q8NB14 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP38Q8NB14 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP38Q8NB14 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP38Q8NB14 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.9■□□□□ 0.94
USP38Q8NB14 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.9■□□□□ 0.94
USP38Q8NB14 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
USP38Q8NB14 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP38Q8NB14 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP38Q8NB14 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP38Q8NB14 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
USP38Q8NB14 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.89■□□□□ 0.94
USP38Q8NB14 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.89■□□□□ 0.94
USP38Q8NB14 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP38Q8NB14 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
USP38Q8NB14 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.89■□□□□ 0.94
USP38Q8NB14 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP38Q8NB14 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
USP38Q8NB14 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP38Q8NB14 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USP38Q8NB14 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
USP38Q8NB14 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP38Q8NB14 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.89■□□□□ 0.93
USP38Q8NB14 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.89■□□□□ 0.93
USP38Q8NB14 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP38Q8NB14 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP38Q8NB14 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.89■□□□□ 0.93
USP38Q8NB14 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.89■□□□□ 0.93
USP38Q8NB14 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.89■□□□□ 0.93
USP38Q8NB14 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP38Q8NB14 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.89■□□□□ 0.93
USP38Q8NB14 AC139530.3-201ENST00000620344 690 ntBASIC20.89■□□□□ 0.93
USP38Q8NB14 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.89■□□□□ 0.93
USP38Q8NB14 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
USP38Q8NB14 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.89■□□□□ 0.93
USP38Q8NB14 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
USP38Q8NB14 ZNF815P-204ENST00000434898 1737 ntBASIC20.89■□□□□ 0.93
USP38Q8NB14 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.89■□□□□ 0.93
USP38Q8NB14 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP38Q8NB14 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
USP38Q8NB14 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
USP38Q8NB14 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP38Q8NB14 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP38Q8NB14 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USP38Q8NB14 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP38Q8NB14 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP38Q8NB14 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP38Q8NB14 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.88■□□□□ 0.93
USP38Q8NB14 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP38Q8NB14 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms