Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RAB42Q8N4Z0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB42Q8N4Z0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB42Q8N4Z0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB42Q8N4Z0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB42Q8N4Z0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
RAB42Q8N4Z0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.27■□□□□ 0.51
RAB42Q8N4Z0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 HMGA1P5-201ENST00000412453 271 ntBASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 AP003041.3-201ENST00000527151 707 ntBASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB42Q8N4Z0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 BX323043.1-201ENST00000641006 1765 ntBASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 RCC2P3-201ENST00000418112 1537 ntBASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 AL049812.1-201ENST00000432563 2267 ntBASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 KRT8P32-201ENST00000512863 1461 ntBASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
RAB42Q8N4Z0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 LIN28AP1-201ENST00000429574 405 ntBASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RAB42Q8N4Z0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 PKD1P1-201ENST00000458669 6805 ntBASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 AL109659.2-201ENST00000606809 1674 ntBASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB42Q8N4Z0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms