Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM42Q8IWZ5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRIM42Q8IWZ5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRIM42Q8IWZ5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRIM42Q8IWZ5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 AL139384.1-201ENST00000612143 3047 ntBASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 AC124283.5-201ENST00000624661 1809 ntBASIC18.7■□□□□ 0.58
TRIM42Q8IWZ5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM42Q8IWZ5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 AC067852.2-201ENST00000590513 2313 ntBASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 AL138781.1-201ENST00000566567 1274 ntBASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 AC142086.2-201ENST00000569753 217 ntBASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 AC006557.6-201ENST00000623071 864 ntBASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM42Q8IWZ5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms