Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB43Q86YS6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RAB43Q86YS6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB43Q86YS6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB43Q86YS6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB43Q86YS6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAB43Q86YS6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB43Q86YS6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB43Q86YS6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB43Q86YS6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB43Q86YS6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB43Q86YS6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB43Q86YS6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB43Q86YS6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB43Q86YS6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB43Q86YS6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB43Q86YS6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
RAB43Q86YS6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RAB43Q86YS6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RAB43Q86YS6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RAB43Q86YS6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB43Q86YS6 AP000523.1-201ENST00000398242 1049 ntBASIC17.89■□□□□ 0.45
RAB43Q86YS6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.89■□□□□ 0.45
RAB43Q86YS6 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.89■□□□□ 0.45
RAB43Q86YS6 AP003041.3-201ENST00000527151 707 ntBASIC17.89■□□□□ 0.45
RAB43Q86YS6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.89■□□□□ 0.45
RAB43Q86YS6 AC140113.3-201ENST00000605663 199 ntBASIC17.89■□□□□ 0.45
RAB43Q86YS6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.89■□□□□ 0.45
RAB43Q86YS6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RAB43Q86YS6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RAB43Q86YS6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB43Q86YS6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB43Q86YS6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 HOMER2P1-201ENST00000455653 964 ntBASIC17.88■□□□□ 0.45
RAB43Q86YS6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB43Q86YS6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAB43Q86YS6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB43Q86YS6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAB43Q86YS6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB43Q86YS6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB43Q86YS6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAB43Q86YS6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB43Q86YS6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAB43Q86YS6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 AC091076.1-201ENST00000610741 619 ntBASIC17.87■□□□□ 0.45
RAB43Q86YS6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB43Q86YS6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB43Q86YS6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms