Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 PRKY-204ENST00000533551 1019 ntBASIC16.96■□□□□ 0.31
SHFQ7M4L6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.96■□□□□ 0.31
SHFQ7M4L6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHFQ7M4L6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.96■□□□□ 0.3
SHFQ7M4L6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHFQ7M4L6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SHFQ7M4L6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SHFQ7M4L6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.96■□□□□ 0.3
SHFQ7M4L6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.96■□□□□ 0.3
SHFQ7M4L6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SHFQ7M4L6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 UNC93B4-201ENST00000505679 747 ntBASIC16.95■□□□□ 0.3
SHFQ7M4L6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHFQ7M4L6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SHFQ7M4L6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 AC098934.4-201ENST00000564127 592 ntBASIC16.94■□□□□ 0.3
SHFQ7M4L6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 AC020916.1-201ENST00000587762 1774 ntBASIC16.94■□□□□ 0.3
SHFQ7M4L6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms