Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 MIR3180-5-201ENST00000583743 153 ntBASIC17.97■□□□□ 0.47
RNF44Q7L0R7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 AC141257.4-201ENST00000634557 245 ntBASIC17.97■□□□□ 0.47
RNF44Q7L0R7 AC136944.6-201ENST00000634818 245 ntBASIC17.97■□□□□ 0.47
RNF44Q7L0R7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF44Q7L0R7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 AC068587.9-201ENST00000641814 219 ntBASIC17.96■□□□□ 0.47
RNF44Q7L0R7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF44Q7L0R7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RNF44Q7L0R7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF44Q7L0R7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF44Q7L0R7 AC036111.1-201ENST00000533973 1582 ntBASIC17.96■□□□□ 0.46
RNF44Q7L0R7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 BCL2-203ENST00000589955 5011 ntBASIC17.95■□□□□ 0.46
RNF44Q7L0R7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 BX664615.1-201ENST00000443558 458 ntBASIC17.95■□□□□ 0.46
RNF44Q7L0R7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 AC083906.6-201ENST00000641366 219 ntBASIC17.95■□□□□ 0.46
RNF44Q7L0R7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF44Q7L0R7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms