Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 AC073592.3-201ENST00000625118 1834 ntBASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 LTB4R2-202ENST00000528054 3092 ntBASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 AP000997.3-201ENST00000623333 2250 ntBASIC18.84■□□□□ 0.61
CDHR3Q6ZTQ4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDHR3Q6ZTQ4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CDHR3Q6ZTQ4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.83■□□□□ 0.61
CDHR3Q6ZTQ4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDHR3Q6ZTQ4 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDHR3Q6ZTQ4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 AL353807.1-201ENST00000427475 662 ntBASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 TSPY23P-201ENST00000440136 739 ntBASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR3Q6ZTQ4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 AL499627.1-201ENST00000569373 2188 ntBASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR3Q6ZTQ4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms