Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 AL031598.1-201ENST00000561511 1773 ntBASIC18.14■□□□□ 0.5
HIST2H2AA3Q6FI13 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HIST2H2AA3Q6FI13 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
HIST2H2AA3Q6FI13 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
HIST2H2AA3Q6FI13 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.14■□□□□ 0.5
HIST2H2AA3Q6FI13 AL138781.2-201ENST00000617896 1843 ntBASIC18.14■□□□□ 0.5
HIST2H2AA3Q6FI13 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 AL020996.1-203ENST00000536896 2307 ntBASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 AL512353.2-201ENST00000448759 1962 ntBASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 AP003071.4-201ENST00000562276 1284 ntBASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 REXO1L10P-201ENST00000615707 1290 ntBASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 REXO1L12P-201ENST00000622156 912 ntBASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 AC096733.2-201ENST00000609937 1394 ntBASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H2AA3Q6FI13 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 MFAP1P1-201ENST00000442257 1255 ntBASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
HIST2H2AA3Q6FI13 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 HEIH-201ENST00000623091 1652 ntBASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 CRYGFP-201ENST00000418459 633 ntBASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 KRT17P2-201ENST00000300992 1314 ntBASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 KRT8P32-201ENST00000512863 1461 ntBASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HIST2H2AA3Q6FI13 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST2H2AA3Q6FI13 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.11■□□□□ 0.49
HIST2H2AA3Q6FI13 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
HIST2H2AA3Q6FI13 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST2H2AA3Q6FI13 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST2H2AA3Q6FI13 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HIST2H2AA3Q6FI13 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms