Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 CICP6-201ENST00000457191 2729 ntBASIC18.06■□□□□ 0.48
RNF220Q5VTB9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 AC073592.3-201ENST00000625118 1834 ntBASIC18.05■□□□□ 0.48
RNF220Q5VTB9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF220Q5VTB9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 AC092368.3-202ENST00000574180 1591 ntBASIC18.04■□□□□ 0.48
RNF220Q5VTB9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 AC060766.5-201ENST00000590539 871 ntBASIC18.04■□□□□ 0.48
RNF220Q5VTB9 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.04■□□□□ 0.48
RNF220Q5VTB9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF220Q5VTB9 AC093525.10-201ENST00000625130 1569 ntBASIC18.04■□□□□ 0.48
RNF220Q5VTB9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms