Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 PCED1CP-201ENST00000419887 785 ntBASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 UPK3BP1-201ENST00000428678 509 ntBASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 FEM1AP3-201ENST00000403722 1741 ntBASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 AC141586.3-201ENST00000562166 1838 ntBASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 AC008556.1-201ENST00000610908 2040 ntBASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 AP000523.1-201ENST00000398242 1049 ntBASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 RCC2P3-201ENST00000418112 1537 ntBASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 HYMAI.1-201ENST00000620949 238 ntBASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
PRAMEF17Q5VTA0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 AL512353.2-201ENST00000448759 1962 ntBASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 MIR3180-5-201ENST00000583743 153 ntBASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 AC091076.1-201ENST00000610741 619 ntBASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 HCG11-201ENST00000411553 5696 ntBASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF17Q5VTA0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.83■□□□□ 0.45
PRAMEF17Q5VTA0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms