Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 IRX1P1-201ENST00000438849 1838 ntBASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 MCCD1P1-208ENST00000445732 328 ntBASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 AL136038.3-201ENST00000561909 1096 ntBASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 AC141586.3-201ENST00000562166 1838 ntBASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 AC034232.1-201ENST00000506026 1064 ntBASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 AC120498.9-201ENST00000339021 3867 ntBASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.91■□□□□ 0.14
ARFGEF3Q5TH69 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 MTMR9LP-203ENST00000426597 1545 ntBASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 MIR3180-1-201ENST00000580374 94 ntBASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 MIR3180-3-201ENST00000584616 94 ntBASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.9■□□□□ 0.14
ARFGEF3Q5TH69 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ARFGEF3Q5TH69 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARFGEF3Q5TH69 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARFGEF3Q5TH69 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ARFGEF3Q5TH69 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARFGEF3Q5TH69 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.89■□□□□ 0.13
ARFGEF3Q5TH69 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ARFGEF3Q5TH69 FEM1AP3-201ENST00000403722 1741 ntBASIC15.89■□□□□ 0.13
ARFGEF3Q5TH69 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.89■□□□□ 0.13
ARFGEF3Q5TH69 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms