Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.99■□□□□ 0.63
KHDC1Q4VXA5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
KHDC1Q4VXA5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KHDC1Q4VXA5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KHDC1Q4VXA5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.99■□□□□ 0.63
KHDC1Q4VXA5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KHDC1Q4VXA5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KHDC1Q4VXA5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KHDC1Q4VXA5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 BX088651.1-201ENST00000540551 451 ntBASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 KRT8P9-201ENST00000558927 1449 ntBASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KHDC1Q4VXA5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 NOC2LP1-202ENST00000452600 2235 ntBASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 AP000692.2-201ENST00000608391 879 ntBASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 TEX21P-204ENST00000641479 1693 ntBASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KHDC1Q4VXA5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 UNC93B2-201ENST00000285383 730 ntBASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 FAM207BP-201ENST00000447172 505 ntBASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 KRT8P11-201ENST00000409686 1436 ntBASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KHDC1Q4VXA5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 AC090164.3-201ENST00000610780 2143 ntBASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms