Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSMST1Q4G0I0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCSMST1Q4G0I0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CCSMST1Q4G0I0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 AC010203.1-204ENST00000548782 407 ntBASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 MIR3180-5-201ENST00000583743 153 ntBASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSMST1Q4G0I0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 SLC25A3P1-201ENST00000443844 931 ntBASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CCSMST1Q4G0I0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 MIR564-202ENST00000385049 94 ntBASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 HMGA1P5-201ENST00000412453 271 ntBASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 AIRN-201ENST00000601203 4374 ntBASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCSMST1Q4G0I0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 AL138781.2-201ENST00000617896 1843 ntBASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.16■□□□□ 0.5
CCSMST1Q4G0I0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms