Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01559Q495D7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01559Q495D7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01559Q495D7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01559Q495D7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01559Q495D7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01559Q495D7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01559Q495D7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LINC01559Q495D7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01559Q495D7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01559Q495D7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01559Q495D7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01559Q495D7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01559Q495D7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC01559Q495D7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01559Q495D7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01559Q495D7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01559Q495D7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01559Q495D7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
LINC01559Q495D7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01559Q495D7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LINC01559Q495D7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01559Q495D7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01559Q495D7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01559Q495D7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LINC01559Q495D7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
LINC01559Q495D7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01559Q495D7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
LINC01559Q495D7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
LINC01559Q495D7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01559Q495D7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01559Q495D7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01559Q495D7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.02□□□□□ -0.17
LINC01559Q495D7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.02□□□□□ -0.17
LINC01559Q495D7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LINC01559Q495D7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC01559Q495D7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LINC01559Q495D7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01559Q495D7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01559Q495D7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01559Q495D7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01559Q495D7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC01559Q495D7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01559Q495D7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC01559Q495D7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 BX276092.2-201ENST00000417668 665 ntBASIC14.01□□□□□ -0.17
LINC01559Q495D7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 PKD1P1-201ENST00000458669 6805 ntBASIC14.01□□□□□ -0.17
LINC01559Q495D7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
LINC01559Q495D7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01559Q495D7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
LINC01559Q495D7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01559Q495D7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01559Q495D7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14□□□□□ -0.17
LINC01559Q495D7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14□□□□□ -0.17
LINC01559Q495D7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC01559Q495D7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14□□□□□ -0.17
LINC01559Q495D7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01559Q495D7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01559Q495D7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01559Q495D7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14□□□□□ -0.17
LINC01559Q495D7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC01559Q495D7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC01559Q495D7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14□□□□□ -0.17
LINC01559Q495D7 RPS20P25-201ENST00000412447 352 ntBASIC14□□□□□ -0.17
LINC01559Q495D7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01559Q495D7 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC14□□□□□ -0.17
LINC01559Q495D7 AF201337.1-201ENST00000520239 748 ntBASIC14□□□□□ -0.17
LINC01559Q495D7 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms