Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.45■□□□□ 0.38
RFX4Q33E94 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.45■□□□□ 0.38
RFX4Q33E94 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RFX4Q33E94 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
RFX4Q33E94 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.45■□□□□ 0.38
RFX4Q33E94 YBX1P10-201ENST00000444752 975 ntBASIC17.45■□□□□ 0.38
RFX4Q33E94 AC006970.2-201ENST00000450065 779 ntBASIC17.45■□□□□ 0.38
RFX4Q33E94 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.45■□□□□ 0.38
RFX4Q33E94 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.45■□□□□ 0.38
RFX4Q33E94 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX4Q33E94 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX4Q33E94 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.45■□□□□ 0.38
RFX4Q33E94 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RFX4Q33E94 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RFX4Q33E94 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX4Q33E94 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX4Q33E94 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RFX4Q33E94 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RFX4Q33E94 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RFX4Q33E94 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RFX4Q33E94 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.44■□□□□ 0.38
RFX4Q33E94 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.44■□□□□ 0.38
RFX4Q33E94 SIRPAP1-201ENST00000448467 1770 ntBASIC17.44■□□□□ 0.38
RFX4Q33E94 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
RFX4Q33E94 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.44■□□□□ 0.38
RFX4Q33E94 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RFX4Q33E94 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFX4Q33E94 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 AL121906.2-201ENST00000621597 723 ntBASIC17.44■□□□□ 0.38
RFX4Q33E94 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.44■□□□□ 0.38
RFX4Q33E94 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RFX4Q33E94 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RFX4Q33E94 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFX4Q33E94 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RFX4Q33E94 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX4Q33E94 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RFX4Q33E94 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX4Q33E94 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RFX4Q33E94 SLC29A4P1-201ENST00000398760 971 ntBASIC17.43■□□□□ 0.38
RFX4Q33E94 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.43■□□□□ 0.38
RFX4Q33E94 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX4Q33E94 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.43■□□□□ 0.38
RFX4Q33E94 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.43■□□□□ 0.38
RFX4Q33E94 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX4Q33E94 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX4Q33E94 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX4Q33E94 HLA-B-256ENST00000639848 1089 ntBASIC17.43■□□□□ 0.38
RFX4Q33E94 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX4Q33E94 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX4Q33E94 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RFX4Q33E94 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX4Q33E94 AC092368.3-202ENST00000574180 1591 ntBASIC17.43■□□□□ 0.38
RFX4Q33E94 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RFX4Q33E94 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX4Q33E94 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX4Q33E94 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX4Q33E94 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX4Q33E94 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
RFX4Q33E94 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX4Q33E94 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX4Q33E94 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RFX4Q33E94 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX4Q33E94 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX4Q33E94 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX4Q33E94 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RFX4Q33E94 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX4Q33E94 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX4Q33E94 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX4Q33E94 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX4Q33E94 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX4Q33E94 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX4Q33E94 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX4Q33E94 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RFX4Q33E94 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX4Q33E94 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms