Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CFHR3Q02985 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.65□□□□□ -0.06
CFHR3Q02985 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.65□□□□□ -0.06
CFHR3Q02985 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
CFHR3Q02985 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.65□□□□□ -0.06
CFHR3Q02985 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
CFHR3Q02985 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CFHR3Q02985 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.65□□□□□ -0.06
CFHR3Q02985 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.65□□□□□ -0.06
CFHR3Q02985 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CFHR3Q02985 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.65□□□□□ -0.06
CFHR3Q02985 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CFHR3Q02985 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CFHR3Q02985 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.65□□□□□ -0.06
CFHR3Q02985 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.64□□□□□ -0.07
CFHR3Q02985 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CFHR3Q02985 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.64□□□□□ -0.07
CFHR3Q02985 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CFHR3Q02985 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.64□□□□□ -0.07
CFHR3Q02985 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.64□□□□□ -0.07
CFHR3Q02985 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.64□□□□□ -0.07
CFHR3Q02985 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CFHR3Q02985 MIR564-202ENST00000385049 94 ntBASIC14.64□□□□□ -0.07
CFHR3Q02985 AK4P3-201ENST00000418260 669 ntBASIC14.64□□□□□ -0.07
CFHR3Q02985 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.64□□□□□ -0.07
CFHR3Q02985 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.64□□□□□ -0.07
CFHR3Q02985 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
CFHR3Q02985 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.64□□□□□ -0.07
CFHR3Q02985 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.64□□□□□ -0.07
CFHR3Q02985 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 AC011558.1-201ENST00000623459 338 ntBASIC14.64□□□□□ -0.07
CFHR3Q02985 AL023973.1-201ENST00000624619 620 ntBASIC14.64□□□□□ -0.07
CFHR3Q02985 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.64□□□□□ -0.07
CFHR3Q02985 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CFHR3Q02985 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CFHR3Q02985 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CFHR3Q02985 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CFHR3Q02985 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.63□□□□□ -0.07
CFHR3Q02985 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.63□□□□□ -0.07
CFHR3Q02985 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.63□□□□□ -0.07
CFHR3Q02985 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CFHR3Q02985 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.63□□□□□ -0.07
CFHR3Q02985 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CFHR3Q02985 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CFHR3Q02985 MTMR9LP-203ENST00000426597 1545 ntBASIC14.63□□□□□ -0.07
CFHR3Q02985 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CFHR3Q02985 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CFHR3Q02985 RNF152P1-201ENST00000397754 604 ntBASIC14.63□□□□□ -0.07
CFHR3Q02985 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.63□□□□□ -0.07
CFHR3Q02985 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.63□□□□□ -0.07
CFHR3Q02985 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.63□□□□□ -0.07
CFHR3Q02985 AC063952.2-201ENST00000498792 1227 ntBASIC14.63□□□□□ -0.07
CFHR3Q02985 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.63□□□□□ -0.07
CFHR3Q02985 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.63□□□□□ -0.07
CFHR3Q02985 AL441883.1-201ENST00000566170 1045 ntBASIC14.63□□□□□ -0.07
CFHR3Q02985 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CFHR3Q02985 AC010331.1-201ENST00000611423 582 ntBASIC14.63□□□□□ -0.07
CFHR3Q02985 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CFHR3Q02985 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CFHR3Q02985 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.63□□□□□ -0.07
CFHR3Q02985 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.63□□□□□ -0.07
CFHR3Q02985 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CFHR3Q02985 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.63□□□□□ -0.07
CFHR3Q02985 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CFHR3Q02985 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CFHR3Q02985 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CFHR3Q02985 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CFHR3Q02985 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CFHR3Q02985 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CFHR3Q02985 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CFHR3Q02985 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.62□□□□□ -0.07
CFHR3Q02985 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CFHR3Q02985 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.62□□□□□ -0.07
CFHR3Q02985 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CFHR3Q02985 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms