Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST1H3AP68431 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.39■□□□□ 0.21
HIST1H3AP68431 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST1H3AP68431 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.39■□□□□ 0.21
HIST1H3AP68431 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.39■□□□□ 0.21
HIST1H3AP68431 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST1H3AP68431 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST1H3AP68431 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.39■□□□□ 0.21
HIST1H3AP68431 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HIST1H3AP68431 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.39■□□□□ 0.21
HIST1H3AP68431 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
HIST1H3AP68431 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
HIST1H3AP68431 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H3AP68431 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 AC009113.1-201ENST00000570267 2443 ntBASIC16.38■□□□□ 0.21
HIST1H3AP68431 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 KRT8P45-201ENST00000414328 1447 ntBASIC16.38■□□□□ 0.21
HIST1H3AP68431 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 CRYGFP-201ENST00000418459 633 ntBASIC16.38■□□□□ 0.21
HIST1H3AP68431 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H3AP68431 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.38■□□□□ 0.21
HIST1H3AP68431 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 AL023284.2-201ENST00000405850 579 ntBASIC16.37■□□□□ 0.21
HIST1H3AP68431 RBM17P1-201ENST00000453646 1190 ntBASIC16.37■□□□□ 0.21
HIST1H3AP68431 KRT18P41-201ENST00000518924 1277 ntBASIC16.37■□□□□ 0.21
HIST1H3AP68431 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 MYC-208ENST00000641036 567 ntBASIC16.37■□□□□ 0.21
HIST1H3AP68431 AP006294.2-201ENST00000641667 209 ntBASIC16.37■□□□□ 0.21
HIST1H3AP68431 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HIST1H3AP68431 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H3AP68431 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H3AP68431 AC112777.1-201ENST00000540175 1423 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms